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Results: 26
Computational tools and workflows in metabolomics
RJM Weber, TN Lawson, RM Salek, TMD Ebbels, RC Glen, R Goodacre, JL Griffin, K Haug, A Koulman, P Moreno, M Ralser, C Steinbeck, WB Dunn, MR Viant
Mar 10, 2017
This work was completed through funding provided by the BBSRC [BB/L005077/1 and BB/M019985/1] and Wellcome Trust [202952/Z/16/Z].
Multiple-testing correction in metabolome-wide association studies.
BACKGROUND: The search for statistically significant relationships between molecular markers and outcomes is challenging when dealing with high-dimensional, noisy and collinear multivariate omics data, such as metabolomic...
Exposure of the HIV-1 broadly neutralizing antibody 10E8 MPER epitope on the membrane surface by gp41 transmembrane domain scaffolds
Victoria Oakes, Johana Torralba, Edurne Rujas, José L Nieva, Carmen Domene, Beatriz Apellaniz
Jun 01, 2018
The 10E8 antibody achieves near-pan neutralization of HIV-1 by targeting the remarkably conserved gp41 membrane-proximal external region (MPER) and the connected transmembrane domain (TMD) of the HIV-1 envelope glycoprotein...
AIDS Vaccines Amino Acid Sequence Antibodies Neutralizing/immunology Antigen-Antibody Reactions Antigens Surface/chemistry Epitopes/immunology HIV Antibodies/immunology HIV Envelope Protein gp41/chemistry HIV-1/immunology Humans Liposomes Models Molecular Molecular Dynamics Simulation Peptide Fragments/immunology Protein Conformation Protein Domains /dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being name=SDG 3 - Good Health and Well-being
Flexoelectric-like radial polarization of single-walled nanotubes from first-principles
Daniel Bennett
Mar 18, 2021
Abstract: Flexoelectricity is the polar response of an insulator to strain gradients such as bending. While the size dependence makes it weak in bulk systems in comparison to piezoelectricity, it can play a bigger role in...
Extraction and Integration of Genetic Networks from Short-Profile Omic Data Sets.
Mass spectrometry technologies are widely used in the fields of ionomics and metabolomics to simultaneously profile the intracellular concentrations of, e.g., amino acids or elements in genome-wide mutant libraries. These...
Extraction and Integration of Genetic Networks from Short-Profile Omic Data Sets
Mass spectrometry technologies are widely used in the fields of ionomics and metabolomics to simultaneously profile the intracellular concentrations of, e.g., amino acids or elements in genome-wide mutant libraries. These...
Azimuthal correlations of high transverse momentum jets at next-to-leading order in the parton branching method
Abstract The azimuthal correlation, $$\Delta \phi _{12}$$
MI Abdulhamid, MA Al-Mashad, AB Martinez, G Bonomelli, I Bubanja, N Crnković, F Colombina, B D’Anzi, S Cerci, M Davydov, LIE Banos, N Forzano, F Hautmann, H Jung, S Kim, AL Quirós, DE Martins, M Mendizabal, KM Figueroa, S Prestel, ST Monfared, C Süslü, DS Cerci, AM van Kampen, P Van Mechelen, A Verbytskyi, Q Wang, H Yang, Y Zhou
Mar 01, 2022
Exposure of the HIV-1 broadly neutralizing antibody 10E8 MPER epitope on the membrane surface by gp41 transmembrane domain scaffolds
Victoria Oakes, Johana Torralba, Edurne Rujas, José L Nieva, Carmen Domene, Beatriz Apellaniz
Jun 01, 2018
The 10E8 antibody achieves near-pan neutralization of HIV-1 by targeting the remarkably conserved gp41 membrane-proximal external region (MPER) and the connected transmembrane domain (TMD) of the HIV-1 envelope glycoprotein...
AIDS Vaccines Amino Acid Sequence Antibodies Neutralizing/immunology Antigen-Antibody Reactions Antigens Surface/chemistry Epitopes/immunology HIV Antibodies/immunology HIV Envelope Protein gp41/chemistry HIV-1/immunology Humans Liposomes Models Molecular Molecular Dynamics Simulation Peptide Fragments/immunology Protein Conformation Protein Domains /dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being name=SDG 3 - Good Health and Well-being
Flexoelectric-like radial polarization of single-walled nanotubes from first-principles
Daniel Bennett
Mar 18, 2021
Abstract: Flexoelectricity is the polar response of an insulator to strain gradients such as bending. While the size dependence makes it weak in bulk systems in comparison to piezoelectricity, it can play a bigger role in...
Internal Derangement of TMJ
Internal derangement of temporomandibular joint can be defined asAnteriomedial displacement of disc, associated posteriosuperior displacement of condyle in the closed jaw position.Temporomandibular joint (TMJ) is a sensitive...
Published by: IJHS Medical Association
Azimuthal correlations of high transverse momentum jets at next-to-leading order in the parton branching method
Abstract The azimuthal correlation, $$\Delta \phi _{12}$$
MI Abdulhamid, MA Al-Mashad, AB Martinez, G Bonomelli, I Bubanja, N Crnković, F Colombina, B D’Anzi, S Cerci, M Davydov, LIE Banos, N Forzano, F Hautmann, H Jung, S Kim, AL Quirós, DE Martins, M Mendizabal, KM Figueroa, S Prestel, ST Monfared, C Süslü, DS Cerci, AM van Kampen, P Van Mechelen, A Verbytskyi, Q Wang, H Yang, Y Zhou
Jan 28, 2022
Internal Derangement of TMJ
Internal derangement of temporomandibular joint can be defined asAnteriomedial displacement of disc, associated posteriosuperior displacement of condyle in the closed jaw position.Temporomandibular joint (TMJ) is a sensitive...
Published by: IJHS Medical Association
Perovskite quantum dot-induced monochromatization for broadband photodetection of wafer-scale molybdenum disulfide
Minji Kim, Garam Bae, Kyeong Nam Kim, Hyeong-ku Jo, Da Som Song, Seulgi Ji, Dohyun Jeon, Semin Ko, Seon Joo Lee, Sungho Choi, Soonmin Yim, Wooseok Song, Sung Myung, Dae Ho Yoon, Ki-Seok An, Sun Sook Lee
Jan 19, 2023
Two-dimensional transition metal dichalcogenide (2D TMD) crystals are versatile platforms for realizing emergent optoelectronic devices. However, the ability to produce large-area 2D TMDs with spatial homogeneity and to...
Published by: Springer Japan
Perovskite quantum dot-induced monochromatization for broadband photodetection of wafer-scale molybdenum disulfide
Minji Kim, Garam Bae, Kyeong Nam Kim, Hyeong-ku Jo, Da Som Song, Seulgi Ji, Dohyun Jeon, Semin Ko, Seon Joo Lee, Sungho Choi, Soonmin Yim, Wooseok Song, Sung Myung, Dae Ho Yoon, Ki-Seok An, Sun Sook Lee
Dec 12, 2022
Two-dimensional transition metal dichalcogenide (2D TMD) crystals are versatile platforms for realizing emergent optoelectronic devices. However, the ability to produce large-area 2D TMDs with spatial homogeneity and to...
Published by: Nature Publishing Group UK
Perovskite quantum dot-induced monochromatization for broadband photodetection of wafer-scale molybdenum disulfide
Abstract Two-dimensional transition metal dichalcogenide (2D TMD) crystals are versatile platforms for realizing emergent optoelectronic devices. However, the ability to produce large-area 2D TMDs...
M Kim, G Bae, KN Kim, HK Jo, DS Song, S Ji, D Jeon, S Ko, SJ Lee, S Choi, S Yim, W Song, S Myung, DH Yoon, KS An, SS Lee
Nov 18, 2022
Structural and functional diversity calls for a new classification of ABC transporters.
Christoph Thomas, Stephen G Aller, Konstantinos Beis, Elisabeth P Carpenter, Geoffrey Chang, Lei Chen, Elie Dassa, Michael Dean, Franck Duong Van Hoa, Damian Ekiert, Robert Ford, Rachelle Gaudet, Xin Gong, I Barry Holland, Yihua Huang, Daniel K Kahne, Hiroaki Kato, Vassilis Koronakis, Christopher M Koth, Youngsook Lee, Oded Lewinson, Roland Lill, Enrico Martinoia, Satoshi Murakami, Heather W Pinkett, Bert Poolman, Daniel Rosenbaum, Balazs Sarkadi, Lutz Schmitt, Erwin Schneider, Yigong Shi, Show-Ling Shyng, Dirk J Slotboom, Emad Tajkhorshid, D Peter Tieleman, Kazumitsu Ueda, András Váradi, Po-Chao Wen, Nieng Yan, Peng Zhang, Hongjin Zheng, Jochen Zimmer, Robert Tampé
Oct 05, 2020
Members of the ATP-binding cassette (ABC) transporter superfamily translocate a broad spectrum of chemically diverse substrates. While their eponymous ATP-binding cassette in the nucleotide-binding domains (NBDs) is highly...
Defect passivation of transition metal dichalcogenides via a charge transfer van der Waals interface.
Jun Hong Park, Atresh Sanne, Yuzheng Guo, Matin Amani, Kehao Zhang, Hema CP Movva, Joshua A Robinson, Ali Javey, John Robertson, Sanjay K Banerjee, Andrew C Kummel
Apr 13, 2018
Integration of transition metal dichalcogenides (TMDs) into next-generation semiconductor platforms has been limited due to a lack of effective passivation techniques for defects in TMDs. The formation of an organic-inorganic...
Electronic band structure of ReS<sub>2</sub> by high-resolution angle-resolved photoemission spectroscopy
James Webb, Lewis Hart, Daniel Wolverson, Chaoyu Chen, Jose Avila, Maria-Carmen Asensio
Sep 18, 2017
The rhenium-based transition metal dichalcogenides (TMDs) are atypical of the TMD family due to their highly anisotropic crystalline structure and are recognized as promising materials for two-dimensional heterostructure...
Enhancing Photoluminescence and Mobilities in WS2 Monolayers with Oleic Acid Ligands.
Arelo OA Tanoh, Jack Alexander-Webber, James Xiao, Géraud Delport, Cyan A Williams, Hope Bretscher, Nicolas Gauriot, Jesse Allardice, Raj Pandya, Ye Fan, Zhaojun Li, Silvia Vignolini, Samuel D Stranks, Stephan Hofmann, Akshay Rao
Aug 19, 2019
Many potential applications of monolayer transition metal dichalcogenides (TMDs) require both high photoluminescence (PL) yield and high electrical mobilities. However, the PL yield of as prepared TMD monolayers is low and...
Reaching the Excitonic Limit in 2D Janus Monolayers by In Situ Deterministic Growth.
Ying Qin, Mohammed Sayyad, Alejandro R-P Montblanch, Matthew SG Feuer, Dibyendu Dey, Mark Blei, Renee Sailus, Dhiren M Kara, Yuxia Shen, Shize Yang, Antia S Botana, Mete Atature, Sefaattin Tongay
Jan 05, 2022
Named after the two-faced Roman god of transitions, transition metal dichalcogenide (TMD) Janus monolayers have two different chalcogen surfaces, inherently breaking the out-of-plane mirror symmetry. The broken mirror symmetry...
Electronic band structure of ReS<sub>2</sub> by high-resolution angle-resolved photoemission spectroscopy
James Webb, Lewis Hart, Daniel Wolverson, Chaoyu Chen, Jose Avila, Maria-Carmen Asensio
Sep 18, 2017
The rhenium-based transition metal dichalcogenides (TMDs) are atypical of the TMD family due to their highly anisotropic crystalline structure and are recognized as promising materials for two-dimensional heterostructure...
Giant photoluminescence enhancement in MoSe2 monolayers treated with oleic acid ligands.
Arelo OA Tanoh, Jack Alexander-Webber, Ye Fan, Nicholas Gauriot, James Xiao, Raj Pandya, Zhaojun Li, Stephan Hofmann, Akshay Rao
Aug 19, 2021
The inherently low photoluminescence (PL) yields in the as prepared transition metal dichalcogenide (TMD) monolayers are broadly accepted to be the result of atomic vacancies (i.e., defects) and uncontrolled doping, which give...
Data standards can boost metabolomics research, and if there is a will, there is a way.
Philippe Rocca-Serra, Reza M Salek, Masanori Arita, Elon Correa, Saravanan Dayalan, Alejandra Gonzalez-Beltran, Tim Ebbels, Royston Goodacre, Janna Hastings, Kenneth Haug, Albert Koulman, Macha Nikolski, Matej Oresic, Susanna-Assunta Sansone, Daniel Schober, James Smith, Christoph Steinbeck, Mark R Viant, Steffen Neumann
Sep 03, 2020
Thousands of articles using metabolomics approaches are published every year. With the increasing amounts of data being produced, mere description of investigations as text in manuscripts is not sufficient to enable re-use...
Molecular basis of ligand recognition and activation of human V2 vasopressin receptor.
Fulai Zhou, Chenyu Ye, Xiaomin Ma, Wanchao Yin, Tristan I Croll, Qingtong Zhou, Xinheng He, Xiaokang Zhang, Dehua Yang, Peiyi Wang, H Eric Xu, Ming-Wei Wang, Yi Jiang
Jan 26, 2021
Vasopressin type 2 receptor (V2R) belongs to the vasopressin (VP)/oxytocin (OT) receptor subfamily of G protein-coupled receptors (GPCRs), which comprises at least four closely related receptor subtypes: V1aR, V1bR, V2R, and...
PhenoMeNal
Kristian Peters, James Bradbury, Sven Bergmann, Marco Capuccini, Marta Cascante, Pedro de Atauri, Timothy MD Ebbels, Carles Foguet, Robert Glen, Alejandra Gonzalez-Beltran, Ulrich L Günther, Evangelos Handakas, Thomas Hankemeier, Kenneth Haug, Stephanie Herman, Petr Holub, Massimiliano Izzo, Daniel Jacob, David Johnson, Fabien Jourdan, Namrata Kale, Ibrahim Karaman, Bita Khalili, Payam Emami Khonsari, Kim Kultima, Samuel Lampa, Anders Larsson, Christian Ludwig, Pablo Moreno, Steffen Neumann, Jon Ander Novella, Claire O'Donovan, Jake TM Pearce, Alina Peluso, Marco Enrico Piras, Luca Pireddu, Michelle AC Reed, Philippe Rocca-Serra, Pierrick Roger, Antonio Rosato, Rico Rueedi, Christoph Ruttkies, Noureddin Sadawi, Reza M Salek, Susanna-Assunta Sansone, Vitaly Selivanov, Ola Spjuth, Daniel Schober, Etienne A Thévenot, Mattia Tomasoni, Merlijn van Rijswijk, Michael van Vliet, Mark R Viant, Ralf JM Weber, Gianluigi Zanetti, Christoph Steinbeck
Jan 02, 2019
BACKGROUND: Metabolomics is the comprehensive study of a multitude of small molecules to gain insight into an organism's metabolism. The research field is dynamic and expanding with applications across biomedical...
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